BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026F05LP1|AL428580
(892 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1115 1754 0.0
>3x_Contig1115
Length = 4702
Score = 1754 bits (885), Expect = 0.0
Identities = 892/893 (99%), Gaps = 1/893 (0%)
Strand = Plus / Minus
Query: 1 atcagagatattcagagaccgtttgttggaagattgcttgaacgaaacgcaggcaggtag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1183 atcagagatattcagagaccgtttgttggaagattgcttgaacgaaacgcaggcaggtag 1124
Query: 61 cgacttaaatcacattacttgtgtttttaagagaatataataggatttgtcgacaattct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1123 cgacttaaatcacattacttgtgtttttaagagaatataataggatttgtcgacaattct 1064
Query: 121 gatctagaaatcgatttttgcccaattagtataggagtccttatattcctgaatcactga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1063 gatctagaaatcgatttttgcccaattagtataggagtccttatattcctgaatcactga 1004
Query: 181 acgatgtcattcttcggttttgacgccacgggccgaaaacctcgtgagag-aaacagcaa 239
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1003 acgatgtcattcttcggttttgacgccacgggccgaaaacctcgtgagaggaaacagcaa 944
Query: 240 ggcgaggaggattctttagatttcgaagaaacgtatcaaggcttgggtgattatgagcca 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 943 ggcgaggaggattctttagatttcgaagaaacgtatcaaggcttgggtgattatgagcca 884
Query: 300 gaggaagatgatttgctcaatgatgaaacttttggtactggagcggatctgggtacagat 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 883 gaggaagatgatttgctcaatgatgaaacttttggtactggagcggatctgggtacagat 824
Query: 360 tttgattttggttacggtaaaggggagcttggcgctggttcaggttctggtagggcacca 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 823 tttgattttggttacggtaaaggggagcttggcgctggttcaggttctggtagggcacca 764
Query: 420 gcaccagctcctgtttcttatgcatctattgcaaatgccaaaatgaacagacaagcagac 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 763 gcaccagctcctgtttcttatgcatctattgcaaatgccaaaatgaacagacaagcagac 704
Query: 480 tgtaaacctggtttcgaacaatcgctggacatgcaacctatggaatctttatggggtaac 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 tgtaaacctggtttcgaacaatcgctggacatgcaacctatggaatctttatggggtaac 644
Query: 540 agctccggtaatcagcaacaacaggtgcaacctcaagcccctacacaattccaagcccca 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 agctccggtaatcagcaacaacaggtgcaacctcaagcccctacacaattccaagcccca 584
Query: 600 ccacaggttcaacagcaaggtgcacctaatgtggaaggattggccattcaatctttagac 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 ccacaggttcaacagcaaggtgcacctaatgtggaaggattggccattcaatctttagac 524
Query: 660 agacaacaacagatggctatgccgcctcaacctggattctatggtatgcaacctccgcag 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 agacaacaacagatggctatgccgcctcaacctggattctatggtatgcaacctccgcag 464
Query: 720 aaccctggctacggctttattccacaagggttccctcaaggtcaataccagcaattccct 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 aaccctggctacggctttattccacaagggttccctcaaggtcaataccagcaattccct 404
Query: 780 gggcaaaatattccccctgttatccctaatcaattcggtaatgccggatttcctaatcaa 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 gggcaaaatattccccctgttatccctaatcaattcggtaatgccggatttcctaatcaa 344
Query: 840 cctgttaaccctcaggaacaattccaacaagtaccaccgataatgtacaatca 892
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 cctgttaaccctcaggaacaattccaacaagtaccaccgataatgtacaatca 291
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5667
Number of Sequences: 1807
Number of extensions: 5667
Number of successful extensions: 44
Number of sequences better than 1.0e-20: 1
length of query: 892
length of database: 10,358,551
effective HSP length: 16
effective length of query: 876
effective length of database: 10,329,639
effective search space: 9048763764
effective search space used: 9048763764
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)